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FishPopTrace Publications FishPopTrace Publications

Helyar SJ, Limborg MT, Bekkevold D, Babbucci M, van Houdt J, et al. (2012) SNP Discovery Using Next Generation Transcriptomic Sequencing in Atlantic Herring (Clupea harengus). PLoS ONE 7(8): e42089. doi:10.1371/journal.pone.0042089 (LINK)

Mei-Yu Chang, Audrey J. Geffen, Jan Kosler, Siv Hjorth Dundas, FishPopTrace Consortium and Gregory E. Maes
(2012),The effect of ablation pattern on LA-ICPMS analysis of otolith element composition in hake, (Merluccius merluccius). Environmental Biology of Fishes. doi: 10.1007/s10641-012-0065-7 (LINK)

LIMBORG, M. T., HELYAR, S. J., De BRUYN, M., TAYLOR, M. I., NIELSEN, E. E., OGDEN, R., CARVALHO, G. R., FPT Consortium and BEKKEVOLD, D. (2012), Environmental selection on transcriptome-derived SNPs in a high gene flow marine fish, the Atlantic herring (Clupea harengus). Molecular Ecology. doi: 10.1111/j.1365-294X.2012.05639.x (LINK)

Chang, M.-Y. and Geffen, A. J. (2012), Taxonomic and geographic influences on fish otolith microchemistry. Fish and Fisheries.
Article first published online: 14 JUN 2012 | DOI: 10.1111/j.1467-2979.2012.00482.x (LINK)

Nielsen, EE, Cariani, A, Mac Aoidh, E, Maes, GE, Milano, I, Ogden, R, Taylor, MI, Hemmer-Hansen, J, Babbucci, M, Bargelloni, L, Bekkevold, D, Diopere, E, Grenfell, L, Helyar, S, Limborg, MT, Martinsohn, JT, McEwing, R, Panitz, F, Patarnello, T, Tinti, F, Van Houdt, J, Volckaert, FAM, Waples, RS, FishPopTrace consortium & GR Carvalho (2012). Gene-associated markers provide tools for tackling illegal fishing and false eco-certification. Nature Communications 3, Article number: 851 doi:10.1038/ncomms1845 (LINK)

E. Mac Aoidh, G. Maes, A. Cariani, E.E. Nielsen, J.TH. Martinsohn, Exploring Geovisualization Symbology for Landscape Genetics (2012) Transactions in GIS. (In press) 

Martinsohn, J & Ogden, R (2008) A forensic genetic approach to European fisheries enforcement. Forensic Science International. Genetic Suppl. Ser. 1, 610-611. (LINK)

Martinsohn, J & Ogden, R (2009) FishPopTrace - Developing SNP-based population genetic assignment methods to investigate illegal fishing. Forensic Science International. Genetics Supp. Ser. 2, 294-296. (LINK)

Cuveliers, EL, Geffen, AJ, Guelinckx, J, Raeymakers, JAM, Skadal, J, Volckaert, FAM, Maes, GE (2010) Microchemical variation in juvenile Solea solea otoliths as a powerful tool for studying connectivity in the North Sea. Mar. Ecol. Prog. Ser. 401, 211-220. (LINK)

Gonzalez, EG, Krey, G, Espiňeira, M, Diez, A, Puyet, A, Bautista, JM (2010) Population proteomics of the European hake (Merluccius merluccius). J Proteome Research, 9, 6392-6404. (LINK)

Martinsohn, JT, Geffen, AJ, Maes, GE, Nielsen, EE, Waples, RS & Carvalho, GR (2011) Tracing Fish and fish products from ocean to fork using advanced molecular technologies. In: In: Food Chain Integrity: A holistic approach to food traceability, safety, quality and authenticity (Ed. Hoorfar, J, Jordan, K & Prugga, R), pp. 259-282. Woodhead Publishing. (LINK)

Helyar, S.J., Hemmer- Hansen, J., Bekkevold, D.,Taylor, M.I., Ogden, R., Limborg, M.T., Cariani, A., Maes, G.E., Diopere, E.,Carvalho, G.R. and Nielsen, E.E. (2011) Application of SNPs for population genetics of non-model organisms: new opportunities and challenges. Molecular Ecology Resources 11 (Suppl. 1), 1–14 (LINK)

Milano, I., Babbucci, M, Panitz, F,Ogden, R, Nielsen, RO, Taylor, MI, Helyar, SJ, Carvalho, GR, Espiñeira, M, Atanassova, M, Tinti, F, Maes, GR, Patarnello, T, the FishPopTrace Consortium, Bargelloni, L (2011) Novel tools for conservation genomics: comparing two high-throughput approaches for SNP discovery in the transcriptome of the European hake. PLoS ONE 6(11): e28008. oi:10.1371/journal.pone.0028008. (LINK)